Chromosome 1

Genes Linked with Cancer (221)

How to use this data table Click on the gene name for detailed information. Type in the Search box e.g. 'germline' or 'Breast Cancer' to search within Chromosome 1; or Sort by clicking on a column heading e.g. 'Gene'.

Gene Location Aliases Abnormalities Implicated in
NOTCH2 1p12 hN2, AGS2, HJCYSSomatic-Brain and CNS Tumours
-Breast Cancer
TENT5C 1p12 FAM46CSomatic-Multiple Myeloma
REG4 1p12 GISP, RELP, REG-IV-Colorectal Cancer
-Pancreatic Cancer
-Prostate Cancer
-Stomach Cancer
HSD3B2 1p12 HSDB, HSD3B, SDR11E2-Adrenocortical Cancer
-Bladder Cancer
-Ovarian Cancer
-Prostate Cancer
-Testicular Cancer
HSD3B1 1p12 HSD3B, HSDB3, HSDB3A, SDR11E1, 3BETAHSD-Breast Cancer
-Prostate Cancer
-Stomach Cancer
-Uterine Sarcoma
CD58 1p13.1 ag3, LFA3, LFA-3-Acute Lymphocytic Leukaemia (ALL)
-Colorectal Cancer
-Leukaemia
-Multiple Myeloma
CHIA 1p13.2 CHIT2, AMCASE, TSA1902-Breast Cancer
-Colorectal Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Nasopharyngeal Cancer
-Prostate Cancer
-Soft Tissue Sarcoma
NRAS 1p13.2 NS6, CMNS, NCMS, ALPS4, N-ras, NRAS1SomaticMany cancer types including:
-Acute Myeloid Leukaemia
-Bladder Cancer
-Colorectal Cancer
-Leukaemia
-Melanoma
-Neuroblastoma
-Noonan Syndrome
-Rhabdomyosarcoma
-Skin Cancer
-Thyroid Cancer
RHOC 1p13.2 H9, ARH9, ARHC, RHOH9Many cancer types including:
-Breast Cancer
-Liver Cancer
-Lung Cancer
-Melanoma
-Ovarian Cancer
-Pancreatic Cancer
TRIM33 1p13.2 ECTO, PTC7, RFG7, TF1G, TIF1G, TIFGAMMA, TIF1GAMMASomatic
RAP1A 1p13.2 RAP1, C21KG, G-22K, KREV1, KREV-1, SMGP21-Breast Cancer
-Lung Cancer
-Thyroid Cancer
GSTM3 1p13.3 GST5, GSTB, GTM3, GSTM3-3-Bladder Cancer
-Breast Cancer
-Laryngeal Cancer
-Lung Cancer
-Oral Cavity Cancer
-Skin Cancer
-Basal Cell Carcinoma (BCC) - Skin
-Stomach Cancer
CSF1 1p13.3 MCSF, CSF-1-Breast Cancer
-Pancreatic Cancer
GSTM1 1p13.3 MU, H-B, GST1, GTH4, GTM1, MU-1, GSTM1-1, GSTM1a-1a, GSTM1b-1bMany cancer types including:
-Acute Lymphocytic Leukemia (ALL), child
-Bladder Cancer
-Breast Cancer
-Colorectal Cancer
-Head and Neck Cancers
-Lung Cancer
-Oral Cavity Cancer
-Prostate Cancer
-Thyroid Cancer
RBM15 1p13.3 OTT, OTT1, SPENSomatic
Translocation
-Acute Myeloid Leukaemia
-Down Syndrome
-Leukaemia
VCAM1 1p21.2 CD106, INCAM-100-Brain Tumours, Childhood
-Breast Cancer
-Kidney Cancer
-Liver Cancer
DPYD 1p21.3 DHP, DPD, DHPDHASE-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Stomach Cancer
BCAR3 1p22.1 NSP2, AND-34, SH2D3B-Breast Cancer
GFI1 1p22.1 SCN2, GFI-1, GFI1A, ZNF163-Leukaemia
TGFBR3 1p22.1 BGCAN, betaglycan-Breast Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Prostate Cancer
-Soft Tissue Sarcoma
-Uterine Sarcoma
CCN1 1p22.3 GIG1, CYR61, IGFBP10-Bone Cancer (primary)
-Breast Cancer
-Cervical Cancer
-Esophageal Cancer
-Lung Cancer
-Osteosarcoma
-Prostate Cancer
LMO4 1p22.3 -Breast Cancer
-Lung Cancer
-Neuroblastoma
BCL10 1p22.3 CLAP, mE10, CIPER, IMD37, c-E10, CARMENSomatic
Translocation
-MALT Lymphoma
-Skin Cancer
-Stomach Cancer
-Testicular Cancer
-Waldenstrom's Macroglobulinemia
FUBP1 1p31.1 FBP, FUBP, hDH VSomatic-Brain Tumours, Childhood
DNAJB4 1p31.1 DjB4, HLJ1, DNAJW-Liver Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Stomach Cancer
LEPR 1p31.3 OBR, OB-R, CD295, LEP-R, LEPRD-Breast Cancer
-Colorectal Cancer
-Endometrial Cancer
-Liver Cancer
-Lung Cancer
-Non-Hodgkin Lymphoma
-Prostate Cancer
JAK1 1p31.3 JTK3, JAK1A, JAK1BSomatic-Acute Lymphocytic Leukaemia (ALL)
-Myeloproliferative Disorders
-Stomach Cancer
GADD45A 1p31.3 DDIT1, GADD45-Breast Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Pancreatic Cancer
-Prostate Cancer
IL23R 1p31.3 -Acute Myeloid Leukaemia
-Bladder Cancer
-Breast Cancer
-Colorectal Cancer
-Esophageal Cancer
-Haematological Malignancies
-Liver Cancer
-Lung Cancer
-Ovarian Cancer
-Stomach Cancer
DIRAS3 1p31.3 ARHI, NOEY2-Breast Cancer
-Ovarian Cancer
ROR1 1p31.3 NTRKR1, dJ537F10.1-Acute Lymphocytic Leukaemia (ALL)
-Breast Cancer
-Chronic Lymphocytic Leukemia
-Lung Cancer
-Stomach Cancer
BLYM 1p32
TACSTD2 1p32.1 EGP1, GP50, M1S1, EGP-1, TROP2, GA7331, GA733-1-Bladder Cancer
-Breast Cancer
-Colorectal Cancer
-Ovarian Cancer
-Prostate Cancer
JUN 1p32.1 AP1, p39, AP-1, cJUN, c-JunSomatic-Bladder Cancer
-Breast Cancer
-Lung Cancer
-Ovarian Cancer
-Prostate Cancer
-Skin Cancer
EPS15 1p32.3 AF1P, AF-1P, MLLT5Somatic
Translocation
-Acute Myeloid Leukaemia
CDKN2C 1p32.3 p18, INK4C, p18-INK4CSomatic-Melanoma
-Skin Cancer
-Wilms Tumour
TAL1 1p33 SCL, TCL5, tal-1, bHLHa17Somatic-Acute Lymphocytic Leukaemia (ALL)
-Acute Lymphocytic Leukemia (ALL), child
STIL 1p33 SIL, MCPH7Somatic-Acute Lymphocytic Leukaemia (ALL)
-Acute Lymphocytic Leukemia (ALL), child
RAD54L 1p34.1 HR54, hHR54, RAD54A, hRAD54-Breast Cancer
-Colorectal Cancer
-Ovarian Cancer
-Pancreatic Cancer
MUTYH 1p34.1 MYHGermline-Adenomatous Polyposis Coli
-Breast Cancer
-Colorectal Cancer
-Hereditary Nonpolyposis Colorectal Cancer (HNPCC)
PRDX1 1p34.1 PAG, PAGA, PAGB, PRX1, PRXI, MSP23, NKEFA, TDPX2, NKEF-A-Breast Cancer
-Esophageal Cancer
-Liver Cancer
-Lung Cancer
-Prostate Cancer
-Stomach Cancer
PTCH2 1p34.1 PTC2-Basal Cell Nevus Syndrome
-Cervical Cancer
-Skin Cancer
-Basal Cell Carcinoma (BCC) - Skin
-Stomach Cancer
-Uterine Sarcoma
PTPRF 1p34.2 LAR, BNAH2-Bladder Cancer
-Brain Tumours, Childhood
-Breast Cancer
-Lung Cancer
-Melanoma
-Prostate Cancer
-Skin Cancer
-Soft Tissue Sarcoma
CDC20 1p34.2 CDC20A, p55CDC, bA276H19.3-Breast Cancer
-Liver Cancer
-Lung Cancer
YBX1 1p34.2 YB1, BP-8, CSDB, DBPB, YB-1, CBF-A, CSDA2, EFI-A, NSEP1, NSEP-1, MDR-NF1-Brain Tumours, Childhood
-Breast Cancer
-Lung Cancer
-Melanoma
-Prostate Cancer
MPL 1p34.2 MPLV, TPOR, C-MPL, CD110, THPOR, THCYT2Germline & Somatic-Acute Myeloid Leukaemia
-Leukaemia
-Myeloproliferative Disorders
SLC2A1 1p34.2 CSE, PED, DYT9, GLUT, DYT17, DYT18, EIG12, GLUT1, HTLVR, GLUT-1, SDCHCN, GLUT1DS-Breast Cancer
-Cervical Cancer
-Kidney Cancer
-Lung Cancer
-Prostate Cancer
-Soft Tissue Sarcoma
-Thyroid Cancer
MYCL 1p34.2 LMYC, L-Myc, MYCL1, bHLHe38Somatic-Bladder Cancer
-Cervical Cancer
-Colorectal Cancer
-Lung Cancer
-Small Cell Lung Cancer
-Medulloblastoma
-Neuroblastoma
-Thyroid Cancer
THRAP3 1p34.3 BCLAF2, TRAP150Somatic-Bone Cancer (primary)
-Liver Cancer
-Parathyroid Cancer
MYCBP 1p34.3 AMY-1-Breast Cancer
-Eye Cancer
-Prostate Cancer
-Stomach Cancer
CSF3R 1p34.3 SCN7, CD114, GCSFR-Acute Myeloid Leukaemia
-Bladder Cancer
-Leukaemia
SFPQ 1p34.3 PSF, POMP100, PPP1R140Somatic-Acute Lymphocytic Leukaemia (ALL)
-Acute Myeloid Leukaemia
-Colorectal Cancer
-Haematological Malignancies
-Kidney Cancer
-Melanoma
LCK 1p35.2 LSK, YT16, IMD22, p56lck, pp58lckSomatic
HDAC1 1p35.2-p35.1 HD1, RPD3, KDAC1, GON-10, RPD3L1-Breast Cancer
-Cervical Cancer
-Prostate Cancer
EPB41 1p35.3 HE, EL1, 4.1R-Liver Cancer
-Prostate Cancer
FGR 1p35.3 SRC2, c-fgr, c-src2, p55-Fgr, p58-Fgr, p55c-fgr, p58c-fgr-Breast Cancer
EXTL1 1p36.11 EXTL-Breast Cancer
-Multiple Hereditary Exostoses
-Neuroblastoma
RUNX3 1p36.11 AML2, CBFA3, PEBP2aC-Bladder Cancer
-Breast Cancer
-Colorectal Cancer
-Eye Cancer
-Liver Cancer
-Lung Cancer
-Pancreatic Cancer
-Stomach Cancer
-Uterine Sarcoma
ARID1A 1p36.11 ELD, B120, CSS2, OSA1, P270, hELD, BM029, MRD14, hOSA1, BAF250, C1orf4, BAF250a, SMARCF1Somatic-Breast Cancer
-Cervical Cancer
-Endometrial Cancer
-Liver Cancer
-Ovarian Cancer
-Pancreatic Cancer
-Uterine Sarcoma
CD52 1p36.11 HE5, CDW52, EDDM5-Chronic Lymphocytic Leukemia
-Leukaemia
-Multiple Myeloma
NR0B2 1p36.11 SHP, SHP1-Liver Cancer
-Lung Cancer
-Prostate Cancer
SLC9A1 1p36.11 APNH, NHE1, LIKNS, NHE-1, PPP1R143-Breast Cancer
-Cervical Cancer
-Chronic Myelogenous Leukemia
-Liver Cancer
-Melanoma
-Pancreatic Cancer
GALE 1p36.11 SDR1E1-Acute Lymphocytic Leukaemia (ALL)
-Acute Myeloid Leukaemia
-Cervical Cancer
-Chronic Myelogenous Leukemia
-Leukaemia
STMN1 1p36.11 Lag, SMN, OP18, PP17, PP19, PR22, LAP18, C1orf215-Breast Cancer
-Esophageal Cancer
-Liver Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
MDS2 1p36.11 Somatic
RAP1GAP 1p36.12 RAPGAP, RAP1GA1, RAP1GAP1, RAP1GAPII-Kidney Cancer
-Melanoma
E2F2 1p36.12 E2F-2-Bladder Cancer
-Bone Cancer (primary)
-Breast Cancer
-Osteosarcoma
-Ovarian Cancer
KDM1A 1p36.12 AOF2, CPRF, KDM1, LSD1, BHC110-Breast Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Prostate Cancer
WNT4 1p36.12 WNT-4, SERKAL-Breast Cancer
-Ovarian Cancer
-Pituitary Tumors
-Prostate Cancer
-Stomach Cancer
-Uterine Sarcoma
CDC42 1p36.12 TKS, G25K, CDC42Hs-Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Lung Cancer
EPHB2 1p36.12 DRT, EK5, ERK, CAPB, Hek5, PCBC, EPHT3, Tyro5, BDPLT22-Colorectal Cancer
-Neuroblastoma
-Prostate Cancer
-Wilms Tumour
MIR1256 1p36.12 MIRN1256, hsa-mir-1256-Esophageal Cancer
-Leukaemia
-Prostate Cancer
SDHB 1p36.13 IP, SDH, CWS2, PGL4, SDH1, SDH2, SDHIPGermline-Adrenocortical Cancer
-Cowden Syndrome
-Gastrointestinal Cancers
-Gastrointestinal Stromal Tumors
-Head and Neck Cancers
-Kidney Cancer
-Pheochromocytoma and Paraganglioma
PLA2G2A 1p36.13 MOM1, PLA2, PLA2B, PLA2L, PLA2S, PLAS1, sPLA2-Adenomatous Polyposis Coli
-Colorectal Cancer
-Lung Cancer
-Prostate Cancer
-Stomach Cancer
NBL1 1p36.13 NB, DAN, NO3, DAND1, D1S1733E-Neuroblastoma
-Prostate Cancer
MIR1290 1p36.13 MIRN1290, hsa-mir-1290-Bone Cancer (primary)
-Cervical Cancer
-Colorectal Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Pancreatic Cancer
PAX7 1p36.13 HUP1, RMS2, PAX7BSomatic
Translocation
-Rhabdomyosarcoma
-Soft Tissue Sarcoma
-Urinary System Cancers
EPHA2 1p36.13 ECK, CTPA, ARCC2, CTPP1, CTRCT6-Breast Cancer
-Cervical Cancer
-Eye Cancer
-Lung Cancer
-Ovarian Cancer
CASP9 1p36.21 MCH6, APAF3, APAF-3, PPP1R56, ICE-LAP6-Cervical Cancer
-Neuroblastoma
-Pancreatic Cancer
-Prostate Cancer
-Skin Cancer
-Thyroid Cancer
PDPN 1p36.21 T1A, GP36, GP40, Gp38, OTS8, T1A2, TI1A, T1A-2, AGGRUS, HT1A-1, PA2.26-Brain Tumours, Childhood
-Lung Cancer
-Oral Cavity Cancer
PRDM2 1p36.21 RIZ, KMT8, RIZ1, RIZ2, KMT8A, MTB-ZF, HUMHOXY1-Breast Cancer
-Colorectal Cancer
-Liver Cancer
TNFRSF1B 1p36.22 p75, TBPII, TNFBR, TNFR2, CD120b, TNFR1B, TNFR80, TNF-R75, p75TNFR, TNF-R-II-Lung Cancer
KIF1B 1p36.22 KLP, CMT2, CMT2A, CMT2A1, HMSNII, NBLST1-Adrenocortical Cancer
-Liver Cancer
-Neuroblastoma
-Pheochromocytoma and Paraganglioma
MTOR 1p36.22 SKS, FRAP, FRAP1, FRAP2, RAFT1, RAPT1-Bladder Cancer
-Breast Cancer
-Cervical Cancer
-Kidney Cancer
-Lung Cancer
-Pancreatic Cancer
-Prostate Cancer
-Stomach Cancer
-Thyroid Cancer
TNFRSF8 1p36.22 CD30, Ki-1, D1S166E-Acute Lymphocytic Leukaemia (ALL)
-Cutaneous T-cell lymphoma
-Hodgkin Lymphoma
-Lymphoma
-Melanoma
-Non-Hodgkin Lymphoma
-Oral Cavity Cancer
-Skin Cancer
-Stomach Cancer
PIK3CD 1p36.22 APDS, PI3K, IMD14, p110D, P110DELTA-Brain Tumours, Childhood
-Cervical Cancer
-Chronic Lymphocytic Leukemia
-Liver Cancer
-Neuroblastoma
-Prostate Cancer
MIR34A 1p36.22 mir-34, MIRN34A, mir-34a, miRNA34A-Bladder Cancer
-Bone Cancer (primary)
-Breast Cancer
-Chronic Lymphocytic Leukemia
-Leukaemia
-Liver Cancer
-Uterine Sarcoma
MTHFR 1p36.22 -Acute Lymphocytic Leukaemia (ALL)
-Colorectal Cancer
-Small Cell Lung Cancer
-Skin Cancer
-Stomach Cancer
-Thyroid Cancer
PER3 1p36.23 GIG13, FASPS3-Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Prostate Cancer
-Stomach Cancer
ERRFI1 1p36.23 MIG6, RALT, MIG-6, GENE-33-Acute Myeloid Leukaemia
-Bone Cancer (primary)
-Endometrial Cancer
-Osteosarcoma
-Prostate Cancer
PARK7 1p36.23 DJ1, DJ-1, GATD2, HEL-S-67p-Breast Cancer
-Eye Cancer
-Laryngeal Cancer
-Pancreatic Cancer
-Prostate Cancer
-Uterine Sarcoma
TNFRSF9 1p36.23 ILA, 4-1BB, CD137, CDw137-Acute Myeloid Leukaemia
-Melanoma
ENO1 1p36.23 NNE, PPH, MPB1, ENO1L1, HEL-S-17-Brain Tumours, Childhood
-Breast Cancer
-Kidney Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Neuroblastoma
-Prostate Cancer
RPL22 1p36.31 EAP, L22, HBP15, HBP15/L22Somatic-Nasopharyngeal Cancer
-Paranasal Sinus and Nasal Cavity Cancer
CAMTA1 1p36.31-p36.23 CANPMRSomatic-Brain Tumours, Childhood
-Cervical Cancer
-Neuroblastoma
-Soft Tissue Sarcoma
TNFRSF25 1p36.31 DR3, TR3, DDR3, LARD, APO-3, TRAMP, WSL-1, GEF720, WSL-LR, PLEKHG5, TNFRSF12-Bladder Cancer
-Neuroblastoma
-Pancreatic Cancer
-Prostate Cancer
-Salivary Gland Cancer
-Urinary System Cancers
CHD5 1p36.31 CHD-5-Colorectal Cancer
-Liver Cancer
-Neuroblastoma
TNFRSF14 1p36.32 TR2, ATAR, HVEA, HVEM, CD270, LIGHTRSomatic-Esophageal Cancer
PRDM16 1p36.32 MEL1, KMT8F, LVNC8, PFM13, CMD1LLSomatic-Acute Myeloid Leukaemia
-Chronic Myelogenous Leukemia
-Leukaemia
-Myelodysplastic Syndromes
TP73 1p36.32 P73-Bladder Cancer
-Breast Cancer
-Lung Cancer
-Neuroblastoma
ISG15 1p36.33 G1P2, IP17, UCRP, IFI15, IMD38, hUCRP-Breast Cancer
-Cervical Cancer
-Melanoma
SKI 1p36.33-p36.32 SGS, SKV-Breast Cancer
-Melanoma
PMAIP1 18q21.32 APR, NOXA-Breast Cancer
-Chronic Lymphocytic Leukemia
IFNG 12q15 IFG, IFI-Breast Cancer
-Cervical Cancer
-Lung Cancer
-Skin Cancer
-Stomach Cancer
HRPT2 1q21-q31 HPT-JTGermline & Somatic-Multiple Endocrine Neoplasia Type 2a
-Parathyroid Cancer
-Uterine Sarcoma
PIAS3 1q21.1 ZMIZ5-Lung Cancer
-Lung Cancer, Non-Small Cell
-Multiple Myeloma
-Prostate Cancer
TXNIP 1q21.1 THIF, VDUP1, ARRDC6, HHCPA78, EST01027-Acute Myeloid Leukaemia
-Breast Cancer
-Liver Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
PDE4DIP 1q21.2 MMGL, CMYA2Somatic-Brain Tumours, Childhood
-Esophageal Cancer
-Lung Cancer
-Ovarian Cancer
MCL1 1q21.2 TM, EAT, MCL1L, MCL1S, Mcl-1, BCL2L3, MCL1-ES, bcl2-L-3, mcl1/EAT-Acute Lymphocytic Leukaemia (ALL)
-Breast Cancer
-Chronic Lymphocytic Leukemia
-Lung Cancer
-Prostate Cancer
-Stomach Cancer
FALEC 1q21.2 FAL1, ncRNA-a1, LINC00568-Ovarian Cancer
BCL9 1q21.2 LGSSomatic
Translocation
-Colorectal Cancer
-Liver Cancer
-Multiple Myeloma
-Non-Hodgkin Lymphoma
S100A3 1q21.3 S100E-Bladder Cancer
-Breast Cancer
-Esophageal Cancer
-Ovarian Cancer
-Stomach Cancer
-Transitional Cell Cancer of the Renal Pelvis and Ureter
SPRR2C 1q21.3 -Esophageal Cancer
-Lung Cancer
-Skin Cancer
SHC1 1q21.3 SHC, SHCA-Breast Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Multiple Endocrine Neoplasia Type 2a
S100A4 1q21.3 42A, 18A2, CAPL, FSP1, MTS1, P9KA, PEL98-Breast Cancer
-Colorectal Cancer
-Lung Cancer
-Osteosarcoma
-Pancreatic Cancer
-Skin Cancer
-Stomach Cancer
S100A2 1q21.3 CAN19, S100L-Breast Cancer
-Cervical Cancer
-Esophageal Cancer
-Head and Neck Cancers
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Melanoma
-Stomach Cancer
S100A7 1q21.3 PSOR1, S100A7c-Bladder Cancer
-Breast Cancer
-Oral Cavity Cancer
-Skin Cancer
-Stomach Cancer
TPM3 1q21.3 TM3, TM5, TRK, CFTD, NEM1, TM-5, TM30, CAPM1, TM30nm, TPM3nu, TPMsk3, hscp30, HEL-189, HEL-S-82p, OK/SW-cl.5Somatic-Breast Cancer
-Lung Cancer
-Prostate Cancer
-Thyroid Cancer
SPRR1B 1q21.3 SPRR1, GADD33, SPR-IB, CORNIFIN-Esophageal Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Skin Cancer
S100A1 1q21.3 S100, S100A, S100-alpha-Bladder Cancer
CRTC2 1q21.3 TORC2, TORC-2-Lung Cancer
-Prostate Cancer
-Uterine Sarcoma
S100A11 1q21.3 MLN70, S100C, HEL-S-43-Colorectal Cancer
-Liver Cancer
-Lung Cancer
-Pancreatic Cancer
-Skin Cancer
-Stomach Cancer
SPRR2B 1q21.3 -Bladder Cancer
-Esophageal Cancer
-Lung Cancer
-Oral Cavity Cancer
-Skin Cancer
S100A10 1q21.3 42C, P11, p10, GP11, ANX2L, CAL1L, CLP11, Ca[1], ANX2LG-Esophageal Cancer
-Liver Cancer
-Lung Cancer
-Ovarian Cancer
-Skin Cancer
-Stomach Cancer
CKS1B 1q21.3 CKS1, ckshs1, PNAS-16, PNAS-18-Breast Cancer
-Multiple Myeloma
-Skin Cancer
SPRR2A 1q21.3 -Bile Duct Cancer
-Esophageal Cancer
-Lung Cancer
-Skin Cancer
S100A8 1q21.3 P8, MIF, NIF, CAGA, CFAG, CGLA, L1Ag, MRP8, CP-10, MA387, 60B8AG-Bladder Cancer
-Breast Cancer
-Cervical Cancer
-Esophageal Cancer
-Skin Cancer
-Stomach Cancer
-Vulvar Cancer
SPRR1A 1q21.3 SPRK-Esophageal Cancer
-Lung Cancer
-Ovarian Cancer
-Skin Cancer
ADAR 1q21.3 DSH, AGS6, G1P1, IFI4, P136, ADAR1, DRADA, DSRAD, IFI-4, K88DSRBP-Astrocytoma, Childhood
-Brain Tumours, Childhood
-Cervical Cancer
-Liver Cancer
-Lung Cancer
-Prostate Cancer
-Wilms Tumour
S100A6 1q21.3 2A9, PRA, 5B10, CABP, CACY, S10A6-Brain and CNS Tumours
-Liver Cancer
-Melanoma
-Pancreatic Cancer
-Soft Tissue Sarcoma
-Stomach Cancer
S100A9 1q21.3 MIF, NIF, P14, CAGB, CFAG, CGLB, L1AG, LIAG, MRP14, 60B8AG, MAC387-Bladder Cancer
-Breast Cancer
-Cervical Cancer
-Esophageal Cancer
-Lung Cancer
-Skin Cancer
-Stomach Cancer
MLLT11 1q21.3 AF1QSomatic
Translocation
-Acute Myeloid Leukaemia
IL6R 1q21.3 IL6Q, gp80, CD126, IL6RA, IL6RQ, IL-6RA, IL-6R-1-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Liver Cancer
-Multiple Myeloma
-Stomach Cancer
ARNT 1q21.3 HIF1B, TANGO, bHLHe2, HIF1BETA, HIF-1beta, HIF1-beta, HIF-1-betaSomatic-Breast Cancer
-Lung Cancer
-Prostate Cancer
YY1AP1 1q22 GRNG, HCCA1, HCCA2, YY1AP-Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Melanoma
ASH1L 1q22 ASH1, KMT2H, MRD52, ASH1L1-Esophageal Cancer
-Lung Cancer
-Pituitary Tumors
LMNA 1q22 FPL, IDC, LFP, CDDC, EMD2, FPLD, HGPS, LDP1, LMN1, LMNC, MADA, PRO1, CDCD1, CMD1A, FPLD2, LMNL1, CMT2B1, LGMD1B-Colorectal Cancer
-Laryngeal Cancer
-Ovarian Cancer
-Skin Cancer
-Soft Tissue Sarcoma
-Stomach Cancer
RAB25 1q22 CATX-8, RAB11C-Breast Cancer
-Kidney Cancer
-Ovarian Cancer
-Wilms Tumour
MUC1 1q22 EMA, MCD, PEM, PUM, KL-6, MAM6, MCKD, PEMT, CD227, H23AG, MCKD1, MUC-1, ADMCKD, ADMCKD1, CA 15-3, MUC-1/X, MUC1/ZD, MUC-1/SECSomatic
Translocation
Overexpression
Many cancer types including:
-Bladder Cancer
-Breast Cancer
-Colorectal Cancer
-Lung Cancer
-Non-Hodgkin Lymphoma
-Pancreatic Cancer
-Stomach Cancer
HDGF 1q23.1 HMG1L2-Bone Cancer (primary)
-Breast Cancer
-Chronic Myelogenous Leukemia
-Liver Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Prostate Cancer
-Wilms Tumour
NTRK1 1q23.1 MTC, TRK, TRK1, TRKA, Trk-A, p140-TrkASomatic
Translocation
Fusion
-Lung Cancer
-Neuroblastoma
-Thyroid Cancer
CD1A 1q23.1 R4, T6, CD1, FCB6, HTA1-Acute Lymphocytic Leukaemia (ALL)
-Colorectal Cancer
-Langerhans Cell Histiocytosis
-Skin Cancer
-Soft Tissue Sarcoma
FCRL4 1q23.1 FCRH4, IGFP2, IRTA1, CD307dSomatic-MALT Lymphoma
-Acute Lymphocytic Leukaemia (ALL)
CD1D 1q23.1 R3, CD1A, R3G1-Brain Tumours, Childhood
-Breast Cancer
-Chronic Lymphocytic Leukemia
-Multiple Myeloma
-Uterine Sarcoma
PRCC 1q23.1 TPRC, RCCP1Somatic
Translocation
-Kidney Cancer
AIM2 1q23.1-q23.2 PYHIN4-Colorectal Cancer
-Gastrointestinal Cancers
-Hereditary Nonpolyposis Colorectal Cancer (HNPCC)
-Prostate Cancer
ETV3 1q23.1 PE1, METS, PE-1-Breast Cancer
-Chronic Lymphocytic Leukemia
-Colorectal Cancer
-Hepatoblastoma
CRP 1q23.2 PTX1-Acute Myeloid Leukaemia
-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Esophageal Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Prostate Cancer
-Stomach Cancer
-Waldenstrom's Macroglobulinemia
APCS 1q23.2 SAP, PTX2, HEL-S-92n-Brain Stem Glioma, Childhood
-Brain Tumours, Childhood
-Colorectal Cancer
PEA15 1q23.2 PED, MAT1, HMAT1, MAT1H, PEA-15, HUMMAT1H, PED-PEA15, PED/PEA15-Brain Tumours, Childhood
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Ovarian Cancer
USF1 1q23.3 UEF, FCHL, MLTF, FCHL1, MLTFI, HYPLIP1, bHLHb11-Breast Cancer
-Colorectal Cancer
-Liver Cancer
FCGR2A 1q23.3 CD32, FCG2, FcGR, CD32A, CDw32, FCGR2, IGFR2, FCGR2A1-Breast Cancer
-Colorectal Cancer
-Multiple Myeloma
-Non-Hodgkin Lymphoma
-Waldenstrom's Macroglobulinemia
PBX1 1q23.3 CAKUHEDSomatic
Translocation
-Acute Lymphocytic Leukaemia (ALL)
-Acute Lymphocytic Leukemia (ALL), child
-Cervical Cancer
-Wilms Tumour
DDR2 1q23.3 TKT, WRCN, MIG20a, NTRKR3, TYRO10-Cervical Cancer
-Hodgkin Lymphoma
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Oral Cavity Cancer
FCGR2B 1q23.3 CD32, FCG2, CD32B, FCGR2, IGFR2, FCGR2C, FcRII-cSomatic-Acute Lymphocytic Leukaemia (ALL)
-Leukaemia
-Waldenstrom's Macroglobulinemia
CD48 1q23.3 BCM1, BLAST, hCD48, mCD48, BLAST1, SLAMF2, MEM-102-Acute Myeloid Leukaemia
-Leukaemia
RXRG 1q23.3 RXRC, NR2B3-Breast Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Thyroid Cancer
SH2D1B 1q23.3 EAT2-Bone Cancer (primary)
-Ewing's Sarcoma
ATF6 1q23.3 ACHM7, ATF6A-Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Prostate Cancer
-Soft Tissue Sarcoma
SDHC 1q23.3 CYBL, PGL3, QPS1, SDH3, CYB560Germline-Adrenocortical Cancer
-Gastrointestinal Stromal Tumors
-Head and Neck Cancers
-Kidney Cancer
-Pheochromocytoma and Paraganglioma
FCGR3A 1q23.3 CD16, FCG3, CD16A, FCGR3, IGFR3, IMD20, FCR-10, FCRIII, FCGRIII, FCRIIIA-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Kaposi Sarcoma
-Non-Hodgkin Lymphoma
SLAMF1 1q23.3 SLAM, CD150, CDw150-Chronic Lymphocytic Leukemia
-Leukaemia
-Lymphoma
-Multiple Myeloma
PRRX1 1q24.2 PMX1, PRX1, AGOTC, PHOX1, PRX-1Somatic-Breast Cancer
-Esophageal Cancer
-Leukaemia
-Oral Cavity Cancer
-Prostate Cancer
-Skin Cancer
POU2F1 1q24.2 OCT1, OTF1, oct-1B-Breast Cancer
-Cervical Cancer
-Chronic Myelogenous Leukemia
-Prostate Cancer
-Waldenstrom's Macroglobulinemia
SLC19A2 1q24.2 TC1, THT1, TRMA, THMD1, THTR1-Acute Lymphocytic Leukaemia (ALL)
-Breast Cancer
-Leukaemia
SELL 1q24.2 TQ1, LAM1, LEU8, LNHR, LSEL, CD62L, LYAM1, PLNHR, LECAM1-Wilms Tumour
FASLG 1q24.3 APTL, FASL, CD178, CD95L, ALPS1B, CD95-L, TNFSF6, TNLG1A, APT1LG1-Bladder Cancer
-Breast Cancer
-Lung Cancer
-Rectal Cancer
-Skin Cancer
-Stomach Cancer
SERPINC1 1q25.1 AT3, AT3D, ATIII, THPH7, ATIII-R2, ATIII-T1, ATIII-T2-Acute Lymphocytic Leukaemia (ALL)
-Breast Cancer
-Colorectal Cancer
-Ewing's Sarcoma
-Liver Cancer
-Uterine Sarcoma
PRDX6 1q25.1 PRX, p29, AOP2, 1-Cys, NSGPx, aiPLA2, HEL-S-128m-Breast Cancer
-Lung Cancer
-Ovarian Cancer
-Prostate Cancer
ABL2 1q25.2 ARG, ABLLSomatic
Translocation
-Acute Lymphocytic Leukaemia (ALL)
LAMC2 1q25.3 B2T, CSF, EBR2, BM600, EBR2A, LAMB2T, LAMNB2-Bladder Cancer
-Cervical Cancer
-Colorectal Cancer
-Head and Neck Cancers
-Liver Cancer
-Lung Cancer
-Oral Cavity Cancer
-Pancreatic Cancer
-Vulvar Cancer
CACNA1E 1q25.3 BII, CACH6, gm139, Cav2.3, EIEE69, CACNL1A6Overexpression-Wilms Tumour
RNASEL 1q25.3 RNS4, PRCA1-Breast Cancer
PLA2G4A 1q31.1 GURDP, cPLA2, PLA2G4, cPLA2-alpha-Breast Cancer
-Colorectal Cancer
-Esophageal Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
PTGS2 1q31.1 COX2, COX-2, PHS-2, PGG/HS, PGHS-2, hCox-2, GRIPGHS-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Esophageal Cancer
-Head and Neck Cancers
-Lung Cancer
-Prostate Cancer
-Skin Cancer
-Stomach Cancer
TPR 1q31.1 Somatic-Cervical Cancer
-Stomach Cancer
-Thyroid Cancer
CDC73 1q31.2 HYX, FIHP, HPTJT, HRPT1, HRPT2, C1orf28-Parathyroid Cancer
-Uterine Sarcoma
PTPRC 1q31.3-q32.1 LCA, LY5, B220, CD45, L-CA, T200, CD45R, GP180-Acute Myeloid Leukaemia
-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Myelodysplastic Syndromes
-Ovarian Cancer
-Pancreatic Cancer
-Skin Cancer
-Soft Tissue Sarcoma
-Testicular Cancer
-Thyroid Cancer
-Waldenstrom's Macroglobulinemia
KDM5B 1q32.1 CT31, PLU1, PUT1, MRT65, PLU-1, JARID1B, PPP1R98, RBP2-H1, RBBP2H1A-Brain Tumours, Childhood
-Breast Cancer
-Melanoma
-Prostate Cancer
-Skin Cancer
BTG2 1q32.1 PC3, APRO1, TIS21-Breast Cancer
-Liver Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Prostate Cancer
KIF14 1q32.1 MKS12, MCPH20-Retinoblastoma
NAV1 1q32.1 POMFIL3, UNC53H1, STEERIN1-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Prostate Cancer
LRRN2 1q32.1 GAC1, LRRN5, LRANK1, FIGLER7-Astrocytoma, Childhood
-Brain and CNS Tumours
-Brain Stem Glioma, Childhood
-Neuroblastoma
-Stomach Cancer
IL10 1q32.1 CSIF, TGIF, GVHDS, IL-10, IL10AMany cancer types including:
-Bladder Cancer
-Cervical Cancer
-Eye Cancer
-Prostate Cancer
-Skin Cancer
-Stomach Cancer
IL24 1q32.1 C49A, FISP, MDA7, MOB5, ST16, IL10B-Brain Tumours, Childhood
-Breast Cancer
-Liver Cancer
-Lung Cancer
-Melanoma
-Neuroblastoma
-Stomach Cancer
ELK4 1q32.1 SAP1Somatic-Breast Cancer
-Melanoma
-Prostate Cancer
MDM4 1q32.1 HDMX, MDMX, MRP1Somatic-Brain Tumours, Childhood
-Breast Cancer
-Retinoblastoma
-Soft Tissue Sarcoma
IKBKE 1q32.1 IKKE, IKKI, IKK-E, IKK-i-Breast Cancer
-Lung Cancer
-Prostate Cancer
ELF3 1q32.1 ERT, ESX, EPR-1, ESE-1-Breast Cancer
-Esophageal Cancer
-Lung Cancer
-Prostate Cancer
-Stomach Cancer
KISS1 1q32.1 HH13, KiSS-1-Breast Cancer
-Colorectal Cancer
-Eye Cancer
-Kidney Cancer
-Melanoma
NR5A2 1q32.1 B1F, CPF, FTF, B1F2, LRH1, LRH-1, FTZ-F1, hB1F-2, FTZ-F1beta-Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Pancreatic Cancer
CHI3L1 1q32.1 GP39, ASRT7, GP-39, YK-40, YKL40, CGP-39, YKL-40, YYL-40, HC-gp39, HCGP-3P, hCGP-39-Astrocytoma, Childhood
-Brain Stem Glioma, Childhood
-Brain Tumours, Childhood
-Breast Cancer
-Cervical Cancer
-Ovarian Cancer
-Rectal Cancer
AVPR1B 1q32.1 V1bR, AVPR3-Adrenocortical Cancer
-Breast Cancer
-Colorectal Cancer
-Lung Cancer
-Lung Cancer, Non-Small Cell
-Pituitary Tumors
SNRPE 1q32.1 SME, Sm-E, HYPT11, snRNP-E-Acute Lymphocytic Leukaemia (ALL)
-Bladder Cancer
-Liver Cancer
-Lung Cancer
-Ovarian Cancer
-Prostate Cancer
SLC45A3 1q32.1 PRST, IPCA6, IPCA-2, IPCA-6, IPCA-8, PCANAP2, PCANAP6, PCANAP8Somatic-Cervical Cancer
-Prostate Cancer
-Stomach Cancer
ADIPOR1 1q32.1 CGI45, PAQR1, ACDCR1, CGI-45, TESBP1A-Breast Cancer
-Colorectal Cancer
-Endometrial Cancer
-Prostate Cancer
-Stomach Cancer
MAPKAPK2 1q32.1 MK2, MK-2, MAPKAP-K2-Lung Cancer
-Neuroblastoma
-Pancreatic Cancer
MYOG 1q32.1 MYF4, myf-4, bHLHc3-Rhabdomyosarcoma
-Soft Tissue Sarcoma
-Wilms Tumour
IRF6 1q32.2 LPS, PIT, PPS, VWS, OFC6, PPS1, VWS1-Skin Cancer
CD55 1q32.2 CR, TC, DAF, CROM, CHAPLE-Acute Lymphocytic Leukaemia (ALL)
-Cervical Cancer
-Chronic Myelogenous Leukemia
-Colorectal Cancer
-Stomach Cancer
LAMB3 1q32.2 AI1A, LAM5, LAMNB1, BM600-125KDA-Bladder Cancer
-Cervical Cancer
-Lung Cancer
-Prostate Cancer
-Skin Cancer
-Stomach Cancer
CD34 1q32.2 -Acute Lymphocytic Leukaemia (ALL)
-Acute Myeloid Leukaemia
-Chronic Myelogenous Leukemia
-Myelodysplastic Syndromes
-Skin Cancer
-Soft Tissue Sarcoma
CD46 1q32.2 MCP, TLX, AHUS2, MIC10, TRA2.10-Breast Cancer
-Cervical Cancer
-Liver Cancer
-Lung Cancer
-Ovarian Cancer
HSD11B1 1q32.2 HDL, 11-DH, HSD11, HSD11B, HSD11L, CORTRD2, SDR26C1, 11-beta-HSD1-Breast Cancer
-Lung Cancer
ATF3 1q32.3 -Breast Cancer
-Colorectal Cancer
-Eye Cancer
-Liver Cancer
-Lung Cancer
-Melanoma
-Prostate Cancer
PROX1 1q32.3 -Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Pancreatic Cancer
NEK2 1q32.3 NLK1, RP67, NEK2A, HsPK21, PPP1R111-Breast Cancer
-Liver Cancer
-Lung Cancer
-Prostate Cancer
TP53BP2 1q41 BBP, 53BP2, ASPP2, P53BP2, PPP1R13A-Breast Cancer
-Cervical Cancer
-Liver Cancer
TGFB2 1q41 LDS4, G-TSF, TGF-beta2-Brain and CNS Tumours
-Brain Stem Glioma, Childhood
-Brain Tumours, Childhood
-Breast Cancer
-Liver Cancer
-Pancreatic Cancer
AIDA 1q41 C1orf80-Lung Cancer
-Oral Cavity Cancer
-Ovarian Cancer
-Prostate Cancer
EPHX1 1q42.12 MEH, EPHX, EPOX, HYL1-Bladder Cancer
-Cervical Cancer
-Colorectal Cancer
-Lung Cancer
-Prostate Cancer
H3-3A 1q42.12 H3F3, H3.3A, H3F3ASomatic-Astrocytoma, Childhood
-Bone Cancer (primary)
-Brain Stem Glioma, Childhood
-Brain Tumours, Childhood
PARP1 1q42.12 PARP, PPOL, ADPRT, ARTD1, ADPRT1, PARP-1, ADPRT 1, pADPRT-1-Breast Cancer
-Lung Cancer
-Melanoma
-Ovarian Cancer
PSEN2 1q42.13 AD4, PS2, AD3L, STM2, CMD1V-Breast Cancer
-Prostate Cancer
WNT3A 1q42.13 -Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Lung Cancer
-Pancreatic Cancer
-Stomach Cancer
ARF1 1q42.13 PVNH8-Bladder Cancer
-Breast Cancer
-Ovarian Cancer
-Stomach Cancer
EGLN1 1q42.2 HPH2, PHD2, SM20, ECYT3, HALAH, HPH-2, HIFPH2, ZMYND6, C1orf12, HIF-PH2-Adrenocortical Cancer
-Breast Cancer
-Cervical Cancer
-Kidney Cancer
-Pheochromocytoma and Paraganglioma
-Waldenstrom's Macroglobulinemia
AKT3 1q43-q44 MPPH, PKBG, MPPH2, PRKBG, STK-2, PKB-GAMMA, RAC-gamma, RAC-PK-gamma-Breast Cancer
-Lung Cancer
-Melanoma
-Ovarian Cancer
-Prostate Cancer
-Skin Cancer
FH 1q43 MCL, FMRD, HsFH, LRCC, HLRCC, MCUL1Germline-Bladder Cancer
-Breast Cancer
-Kidney Cancer
-Nasopharyngeal Cancer
-Ovarian Cancer
-Skin Cancer
-Stomach Cancer
-Uterine Sarcoma
-von Hippel-Lindau Disease
-Wilms Tumour
EXO1 1q43 HEX1, hExoI-Breast Cancer
-Cervical Cancer
-Colorectal Cancer
-Hereditary Nonpolyposis Colorectal Cancer (HNPCC)
-Lung Cancer
-Rectal Cancer
-Stomach Cancer
SMYD3 1q44 KMT3E, ZMYND1, ZNFN3A1, bA74P14.1-Breast Cancer
-Colorectal Cancer
-Liver Cancer
-Lung Cancer

Structural Abnormalities

Selected list of common recurrent structural abnormalities - Chromosome 1:

This is a highly selective list aiming to capture structural abnormalies which are frequesnt and/or significant in relation to diagnosis, prognosis, and/or characterising specific cancers. For a much more extensive list see the Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer.

Further Resources (3 links)

Disclaimer: This site is for educational purposes only; it can not be used in diagnosis or treatment.

Cite this page: Cotterill SJ. Chromosome 1, Cancer Genetics Web: http://www.cancer-genetics.org/clinkc01.htm Accessed:

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